Publications

White R, Sotillo J, Ancarola ME, Borup A, Boysen AT, Buck AH, et al. Special considerations for studies of extracellular vesicles from parasitic helminths: A community-led roadmap to increase rigour and reproducibility. J Extracell Vesicles. 2023 Jan;12(1):e12298. doi:10.1002/jev2.12298. PMID: 36604533; PMCID: PMC9816087.

White R, Blow F, Buck AH, Duque-Correa MA. Organoids as tools to investigate
gastrointestinal nematode development and host interactions. Front Cell Infect
Microbiol. 2022 Aug 12;12:976017. doi: 10.3389/fcimb.2022.976017. PMID:
36034712; PMCID: PMC9411932.

Buck AH.Cell. 2022 Mar 31;185(7):1114-1116. doi: 10.1016/j.cell.2022.03.010.PMID: 35364031 Cells choose their words wisely.

Hoffmann KF, Hokke CH, Loukas A, Buck AH.  Helminth extracellular vesicles: great balls of wonder. Int J Parasitol. 2020 Aug;50(9):621-622. doi: 10.1016/j.ijpara.2020.07.002.

White R, Kumar S, Chow FW, Robertson E, Hayes KS, Grencis RK, Duque-Correa MA, Buck AH. Extracellular vesicles from Heligmosomoides bakeri and Trichuris muris contain distinct microRNA families and small RNAs that could underpin different functions in the host. Int J Parasitol. 2020 Aug;50(9):719-729. doi: 10.1016/j.ijpara.2020.06.002. Epub 2020 Jul 11.PMID: 32659276

Bermudez-Barrientos JR, Ramirez-Sanchez O, Chow FW, Buck AH, Abreu-Goodger C. (2020). Disentangling sRNA-Seq data to study RNA communication between species. Nucleic Acids Research48(4):e21

Ressel S, Rosca A, Gordon K, Buck, A.H. (2019). Extracellular RNA in viral-host interactions: Thinking outside the cell. Wiley Interdiscip Rev RNA 2019:e1535.

Cai Q, He B, Weiberg A, Buck AH, Jin H. (2019). Small RNAs and extracellular vesicles: New mechanisms of cross-species communication and innovative tools for disease control. PLoS Pathogens15(12):e1008090.

Quintana J, Kumar S, Ivens A, Chow FWN, Hoy AM, Fulton A, Dickinson P, Martin C, Taylor M, Babayan SA, Buck AH. (2019). Comparative analysis of small RNAs released by the filarial nematode Litomosoides sigmodontis in vitro and in vivo. PLoS NTDS13(11): e0007811.

Johnston H, Dickinson P, Ivens A, Buck AH, Levine RD, Remacle F, Campbell CJ.(2019). Intracellular redox potential is correlated with miRNA expression in MCF7 cells under hypoxic conditions. PNAS 116(39): 19753-19759.

Chow FW, Koutsovoulos G, Ovando-Vazquez C, Neophytou K, Bermudez Barrientos JR, Laetsch DR, Robertson E, Kumar S, Claycomb JM, Blaxter M, Abreu-Goodger C, Buck AH (2019). Secretion of an Argonaute protein by a parasitic nematode and the evolution of its siRNA guides. Nucleic Acids Research, https://doi.org/10.1093/nar/gkz142.

Borland K, Diesend J, Ito-Kureha T, Heissmeyer V, Hammann C, Buck A.H., Michalakis S, Kellner S (2019): Production and Application of Stable Isotope-Labeled Internal Standards for RNA Modification Analysis. Genes (Basel), 10 (1). pii: E26.

Bielska E, Birch PRJ, Buck AH, Abreu-Goodger C, Innes RW, Jin H, Pfaffl MW, Robatzek S, Regev-Rudzki N, Tisserant C, Wang S, Weiberg A (2019). Highlights of the mini-symposium on extracellular vesicles in inter-organismal communication, held in Munich, Germany, August 2018. J Extracell Vesicles 2019, 8:1590116.

Thery C, Witwer KW, Aikawa E, Alcaraz MJ, Anderson JD, Andriantsitohaina R, Antoniou A, Arab T, Archer F, Atkin-Smith GK, et al: Minimal information for studies of extracellular vesicles 2018 (MISEV2018): a position statement of the International Society for Extracellular Vesicles and update of the MISEV2014 guidelines. J Extracell Vesicles 2018, 7:1535750.

Driedonks T.A.P., van der Grein S.G., Ariyurek Y, Buermans H.P.J., Jekel H, Chow F.W.N., Wauben M.H.M., Buck A.H., t Hoen P.A.C., Nolte-‘t Hoen E.N.M. (2018) Immune stimuli shape the small non-coding transcriptome of extracellular vesicles released by dendritic cells. Cell Mol Life Sci 2018, 75:3857-3875.

Coakley, G., McCaskill, J.L., Borger, J.G., Simbari, F., Robertson, E., Millar, M., Harcus, Y., McSorley, H.J., Maizels, R.M., and Buck, A.H. (2017). Extracellular Vesicles from a Helminth Parasite Suppress Macrophage Activation and Constitute an Effective Vaccine for Protective Immunity. Cell Reports 19, 1545-1557.

McCaskill J, Ressel S, Alber A, Redford J, Power U, Schwarze J, Dutia B, Buck AH (2017) Broad-spectrum inhibition of respiratory virus infection by microRNA mimics targeting p38 MAPK signalling. Mol Therapy Nucleic Acids 7:256-266.

Mateescu, B., Kowal, E.J., van Balkom, B.W., Bartel, S., Bhattacharyya, S.N., Buzas, E.I., Buck, A.H., de Candia, P., Chow, F.W., Das, S., et al. (2017). Obstacles and opportunities in the functional analysis of extracellular vesicle RNA – an ISEV position paper. Journal of Extracellular Vesicles 6, 1286095.

Claycomb J, Abreu-Goodger C, Buck AH (2017) RNA-mediated communication between helminths and their hosts: the missing links. RNA Biology. doi: 10.1080/15476286.2016.1274852.

Quintana JF, Babayan SA, Buck AH (2016). Small RNAs and extracellular vesicles in filarial nematodes: from nematode development to diagnostics. Parasite Immunology doi: 10.1111/pim.12395; PMID: 27748953.

Simbari F, McCaskill J, Coakley G, Millar M, Maizels RM, Fabriás G, Casas J, Buck AH (2016).  Plasmalogen enrichment in exosomes secreted by a nematode parasite versus those derived from its mouse host: implications for exosome stability and biology. Journal of Extracellular Vesicles 5:30741. doi: 10.3402/jev.v5.30741.

Coakley G, Buck AH, Maizels RM (2016). Host parasite communications-Messages from helminths for the immune system. Mol Biochem Parasitol. 2016 Jul;208(1):33-40. doi: 10.1016/j.molbiopara.2016.06.003.

Miesen P, Ivens A, Buck AH, van Rij RP (2016): Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs. PLoS Negl Trop Dis 2016, 10:e0004452.

Tzelos T, Matthews JB, Buck AH, Simbari F, Frew D, Inglis NF, McLean K, Nisbet AJ, Whitelaw CB, Knox DP, McNeilly TN (2016). A preliminary proteomic characterization of extracellular vesicles released by the ovine parasitic nematode, Teladorsagia circumcinta. Vet Parasitology 221:84-92. doi: 10.1016/j.vetpar.2016.03.008.

Coakley G, Maizels RM, Buck AH (2015). Exosomes and other extracellular vesicles: the new communicators in parasite infections. Trends in Parasitology 31(10):477-489.

Nowacki FC, Swain MT, Klychnikov OI, Niazi U, Ivens A, Quintana JF, Hensbergen PJ, Hokke CH, Buck AH and Hoffmann KF (2015). Protein and small non-coding RNA enriched extracellular vesicles are released by the pathogenic bloodfluke Schistosoma mansoni. Journal of Extracellular Vesicles 4:28665, http://dx.doi.org/10.3402/jev.v4.28665.

Buck AH, Ivens A, Gordon K, Craig M, Houzelle A, Roche A, Turnbull N and Beard PM (2015). “Quantitative Analysis of MicroRNAs in Vaccinia virus Infection Reveals Diversity in Their Susceptibility to Modification and Suppression.” PLoS One 10(7): e0131787.

Webster CL, Waldron FM, Robertson S, Crowson D, Ferrari G, Quintana JF, Brouqui JM, Bayne EH, Longdon B, Buck AH, Lazzaro BP, Akorli J, Haddrill PR and Obbard DJ (2015). “The Discovery, Distribution, and Evolution of Viruses Associated with Drosophila melanogaster.” PLoS Biol 13(7): e1002210.

McCaskill J., Praihirunkit P, Sharp PM and Buck AH (2015). “RNA-mediated degradation of microRNAs: A widespread viral strategy?” RNA Biol 12(6): 579-585.

Quintana JF, Makepeace BL, Babayan S, Ivens A, Pfarr KM, Blaxter M, Debrah A, Wanji S, Ngangyung HF, Bah GS, Tanya VT, Taylor DW, Hoerauf A, Buck AH (2015) Extracellular Onchocerca-derived small RNAs in host nodules and blood, Parasites & Vectors 8(1):58.

Kalla R, Ventham NT, Kennedy NA, Quintana JF, Nimmo ER, Buck AH Satsangi J. (2014) MicroRNAs-New players in Inflammatory Bowel Disease Gut, doi:10.1136/gutjnl-2014-307891.

Buck AH, Coakley G, Simbari F, Kumar S, Le Bihan T, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Blaxter M, Ivens A, Maizels RM “Exosomes secreted by a nematode parasite transfer small RNAs to mammalian cells and regulate genes of the innate immune system” Nature Communications DOI:10.1038/ncomm6488.

Hoy A, Lundie R, Ivens A, Quintana J, NauschN, Forster T, Jones F, Kabatereine K,DunneDW, MutapiF, MacDonald AS, Buck AH (2014) “Parasite-derived microRNAs in host serum as a novel biomarkers of helminth infection” PLOS NTDS DOI:10.1371/journal.pntd.0002701.

Buck, A., & Blaxter, M., “Functional diversification of Argonautes in nematodes: an expanding universe“ 2013 Biochem Soc Trans 41 (881-886).

Libri, V., Miesen, P., van RIj, RP., Buck, AH. “Regulation of microRNA biogenesis and turnover by animals and their viruses” (2013) Cell Mol Life Sci, DOI 10.1007/s00018-012-1257-1.

Rückerl, D., Jenkins, S.J., Laqtom, N.N., Gallagher, I.J., Sutherland, T.E., Duncan, S., Buck, A.H., and Allen, J. Induction of IL-4Rα-dependent microRNAs identifies PI3K/Akt signaling as essential for IL-4-driven murine macrophage proliferation in vivo. 2012 Blood doi:10.1182/blood-2012-02-408252.

Hoy, A.K., & Buck, A.H. Extracellular small RNAs: what, where, why? Biochem Soc Trans. 2012 40(4): 886-90.

Libri, V., Helwak, A., Miesen, P., Santhakumar, D., Borger, J.G., Kudla, G., Grey, F., Tollervey, D., Buck, A.H., Murine cytomegalovirus encodes a miR-27 inhibitor disguised as a target. 2011 PNAS 10.1073/pnas.1114204109.

Laqtom, N.N., & Buck, A.H., microRNA manipulation as a host-targeted antiviral therapeutic strategy. 2011 European Pharmaceutical Review 16 (6) 52-55.

Santhakumar, D., Forster, T., Laqtom, N., Fragkoudis, F., Dickinson, P., Abreu-Goodger, C., Manakov, SA., Roy Choudhury, N., Griffiths, SJ., Vermeulen, A., Enright, AJ., Dutia, B., Kohl, A., Ghazal, P., Buck, AH. 2010 Combined agonist-antagonist genome-wide functional screening identifies broadly active antiviral microRNAs. PNAS 107, 13830-13835.

Buck, A.H., Perot, J., Chisholm, M.A., Kumar, D.S., Tuddenham, L., Cognat, V., Marcinowski, L., Dolken, L., and Pfeffer, S. 2010 Post-transcriptional regulation of miR-27 in murine cytomegalovirus infection. RNA 16(2): 307-315.

Obbard, D.J., Gordon, K.H., Buck, A.H., and Jiggins, F.M. 2009 “The evolution of RNAi as a defence against viruses and transposable elements“. Philos Trans R Soc Lond B Biol Sci 364(1513): 99-115.

Buck, A.H., Santoyo-Lopez, J., Robertson, K.A., Kumar, D.S., Reczko, M., and Ghazal, P. 2007. “Discrete clusters of virus-encoded micrornas are associated with complementary strands of the genome and the 7.2-kilobase stable intron in murine cytomegalovirus”. J Virology 81(24): 13761-13770.